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  • Negative cofitness for PS417_26370 from Pseudomonas simiae WCS417

    RNA helicase
    SEED: ATP-dependent 23S rRNA helicase DbpA
    KEGG: ATP-independent RNA helicase DbpA

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_27610 hypothetical protein -0.54
    2 PS417_27605 hypothetical protein -0.48
    3 PS417_12595 transcriptional regulator -0.43
    4 PS417_23155 pilus assembly protein PilW -0.36
    5 PS417_28250 cell wall assembly protein -0.34
    6 PS417_06385 DEAD/DEAH box helicase -0.33
    7 PS417_09630 glycosyl transferase -0.32
    8 PS417_19560 amino acid ABC transporter substrate-binding protein -0.32
    9 PS417_13425 cupin -0.31
    10 PS417_06365 RNA polymerase sigma factor -0.31
    11 PS417_01185 ribosomal protein S6 modification protein -0.31
    12 PS417_27810 ribonuclease PH -0.30
    13 PS417_24680 murein transglycosylase -0.30
    14 PS417_21040 sulfurylase -0.30
    15 PS417_28535 TonB-dependent receptor -0.29
    16 PS417_19125 LysR family transcriptional regulator -0.29
    17 PS417_26525 DEAD/DEAH box helicase -0.29
    18 PS417_16160 ABC transporter substrate-binding protein -0.29
    19 PS417_01180 ribosomal protein S6 modification protein -0.29
    20 PS417_24605 thiamine-phosphate pyrophosphorylase -0.29

    Or look for positive cofitness