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  • Negative cofitness for GFF5117 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Glycine cleavage system transcriptional activator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2856 Transcriptional regulator, LysR family -0.60
    2 GFF2046 no description -0.59
    3 GFF5154 DNA-binding transcriptional regulator, MocR family / aminotransferase domain -0.59
    4 GFF4553 RNA chaperone ProQ -0.59
    5 GFF2815 Primosomal replication protein N -0.59
    6 GFF2687 Protein containing domains DUF404, DUF407, DUF403 -0.59
    7 GFF6884 FIG00932717: hypothetical protein -0.58
    8 GFF4383 hypothetical protein -0.57
    9 GFF4747 Quinone oxidoreductase (EC 1.6.5.5) -0.57
    10 GFF4840 FIG00956188: hypothetical protein -0.56
    11 GFF2763 33 kDa chaperonin HslO -0.56
    12 GFF2859 Excinuclease ABC subunit C -0.55
    13 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) -0.55
    14 GFF6324 Kup system potassium uptake protein -0.54
    15 GFF1591 FIG066100: Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor -0.54
    16 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) -0.53
    17 GFF1738 Uncharacterized proteins YbdD and YjiX -0.53
    18 GFF5288 Uncharacterized protein PA4513 -0.53
    19 GFF982 Cell division protein ZapE -0.53
    20 GFF446 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) -0.52

    Or look for positive cofitness