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  • Negative cofitness for GFF5107 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.61
    2 GFF5203 hypothetical protein -0.58
    3 GFF2963 Efflux transport system, outer membrane factor (OMF) lipoprotein -0.56
    4 GFF2393 Biopolymer transport protein ExbD/TolR -0.54
    5 GFF5590 no description -0.53
    6 GFF2537 Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB -0.53
    7 GFF5958 FIG00537018: hypothetical protein -0.52
    8 GFF4166 Cytidine deaminase (EC 3.5.4.5) -0.51
    9 GFF5228 Arachidonate 15-lipoxygenase precursor (EC 1.13.11.33) -0.50
    10 GFF1039 Far-related protein -0.50
    11 GFF607 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) -0.49
    12 GFF6002 DNA topoisomerase IB (poxvirus type) (EC 5.99.1.2) -0.48
    13 GFF4328 hypothetical protein -0.48
    14 GFF1586 2-dehydropantoate 2-reductase (EC 1.1.1.169) -0.48
    15 GFF1620 Large exoproteins involved in heme utilization or adhesion -0.48
    16 GFF5395 Glutamine ABC transporter, ATP-binding protein GlnQ -0.48
    17 GFF5831 Ketosteroid isomerase-related protein -0.48
    18 GFF617 no description -0.47
    19 GFF5917 T6SS component TssB (ImpB/VipA) -0.46
    20 GFF3060 Dihydrodipicolinate synthase family -0.46

    Or look for positive cofitness