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  • Negative cofitness for PS417_26160 from Pseudomonas simiae WCS417

    hypothetical protein
    SEED: RNA polymerase sigma factor

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_11890 Inositol transport system ATP-binding protein (from data) -0.22
    2 PS417_11850 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) (from data) -0.21
    3 PS417_11875 Inositol 2-dehydrogenase (EC 1.1.1.18) (from data) -0.20
    4 PS417_28050 hypothetical protein -0.19
    5 PS417_11855 Myo-inosose-2 dehydratase (EC 4.2.1.44) (from data) -0.19
    6 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase -0.19
    7 PS417_17510 histidine kinase -0.18
    8 PS417_11905 chemotaxis protein -0.18
    9 PS417_22400 7-cyano-7-deazaguanine synthase -0.18
    10 PS417_11090 LacI family transcriptional regulator -0.18
    11 PS417_11870 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data) -0.18
    12 PS417_13490 hypothetical protein -0.17
    13 PS417_15035 alkylhydroperoxidase -0.17
    14 PS417_26525 DEAD/DEAH box helicase -0.17
    15 PS417_15575 histidine kinase -0.17
    16 PS417_04230 lipoprotein -0.16
    17 PS417_18435 hypothetical protein -0.16
    18 PS417_11765 ABC transporter substrate-binding protein -0.16
    19 PS417_14535 alpha/beta hydrolase -0.16
    20 PS417_11860 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) -0.16

    Or look for positive cofitness