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  • Negative cofitness for PS417_26065 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_04105 ABC transporter ATP-binding protein -0.35
    2 PS417_17300 RND transporter -0.29
    3 PS417_17295 RND transporter MFP subunit -0.29
    4 PS417_11820 histidine kinase -0.28
    5 PS417_17290 RND transporter -0.25
    6 PS417_04690 transcriptional regulator -0.24
    7 PS417_17285 hypothetical protein -0.22
    8 PS417_14935 transposase -0.19
    9 PS417_26715 peptidase P60 -0.18
    10 PS417_14560 TonB-dependent receptor -0.18
    11 PS417_01790 glucan biosynthesis protein G -0.18
    12 PS417_01795 glucosyltransferase MdoH -0.17
    13 PS417_23135 GTP-binding protein -0.17
    14 PS417_12695 mannitol dehydrogenase -0.17
    15 PS417_02530 iron ABC transporter substrate-binding protein -0.17
    16 PS417_28450 XRE family transcriptional regulator -0.17
    17 PS417_22845 membrane protein -0.17
    18 PS417_07910 hypothetical protein -0.17
    19 PS417_25035 hypothetical protein -0.16
    20 PS417_10815 TetR family transcriptional regulator -0.16

    Or look for positive cofitness