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  • Negative cofitness for PS417_25930 from Pseudomonas simiae WCS417

    pyrroloquinoline quinone biosynthesis protein PqqC
    SEED: Pyrroloquinoline-quinone synthase (EC 1.3.3.11)
    KEGG: pyrroloquinoline-quinone synthase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_09620 lipopolysaccharide biosynthesis protein -0.32
    2 PS417_24570 AsnC family transcriptional regulator -0.27
    3 PS417_01780 proline iminopeptidase -0.27
    4 PS417_09635 mannose-1-phosphate guanylyltransferase -0.26
    5 PS417_04005 ornithine decarboxylase -0.25
    6 PS417_09595 membrane protein -0.23
    7 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein -0.23
    8 PS417_12210 ABC transporter substrate-binding protein -0.23
    9 PS417_09610 beta-xylosidase -0.23
    10 PS417_09585 acetyltransferase -0.23
    11 PS417_07160 glycine cleavage system protein R -0.23
    12 PS417_11760 Fis family transcriptional regulator -0.22
    13 PS417_09625 sugar ABC transporter substrate-binding protein -0.22
    14 PS417_17690 amidase -0.22
    15 PS417_24385 tRNA (uracil-5-)-methyltransferase -0.22
    16 PS417_21725 amino acid transporter -0.21
    17 PS417_17000 MerR family transcriptional regulator -0.21
    18 PS417_06140 cold-shock protein -0.21
    19 PS417_18175 MFS transporter -0.20
    20 PS417_04550 hypothetical protein -0.20

    Or look for positive cofitness