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  • Negative cofitness for GFF5043 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 9, phospholipid)
    SEED: ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A
    KEGG: putative ABC transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF800 hypothetical protein -0.57
    2 GFF4174 FIG00919961: hypothetical protein -0.57
    3 GFF1366 Uncharacterized MFS-type transporter -0.54
    4 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) -0.53
    5 GFF412 Transcription-repair coupling factor -0.51
    6 GFF1136 hypothetical protein -0.51
    7 GFF4588 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) -0.51
    8 GFF2122 Type IV pilus biogenesis protein PilE -0.51
    9 GFF5593 no description -0.50
    10 GFF3514 no description -0.50
    11 GFF609 hypothetical protein -0.50
    12 GFF4650 Transcriptional regulator, PadR family -0.50
    13 GFF2090 Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) -0.49
    14 GFF4490 Site-specific tyrosine recombinase XerC -0.49
    15 GFF2998 Virulence factor BrkB -0.49
    16 GFF2650 hypothetical protein -0.48
    17 GFF6546 hypothetical protein -0.47
    18 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) -0.47
    19 GFF1338 ABC transporter, permease protein 1 RSc1751 -0.47
    20 GFF104 General secretion pathway protein D -0.47

    Or look for positive cofitness