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  • Negative cofitness for GFF5038 from Variovorax sp. SCN45

    Tetracycline resistance, MFS efflux pump => Tet(C)
    KEGG: MFS transporter, DHA1 family, tetracycline resistance protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4333 Transcriptional regulator, LysR family -0.62
    2 GFF929 Transcriptional regulator, IclR family -0.57
    3 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) -0.56
    4 GFF21 no description -0.56
    5 GFF2173 no description -0.56
    6 GFF275 FIG00349534: hypothetical protein -0.56
    7 GFF299 Ribosomal silencing factor RsfA -0.54
    8 GFF5071 AmpG permease -0.54
    9 GFF2987 CBS domain protein -0.53
    10 GFF3547 no description -0.52
    11 GFF2136 Ribokinase (EC 2.7.1.15) -0.52
    12 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) -0.52
    13 GFF3369 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis -0.52
    14 GFF7020 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.52
    15 GFF7364 no description -0.52
    16 GFF5548 Urea carboxylase (EC 6.3.4.6) without Allophanate hydrolase 2 domains -0.52
    17 GFF6591 Transcriptional regulator, GntR family -0.52
    18 GFF4539 no description -0.52
    19 GFF1098 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) -0.51
    20 GFF6653 Aminotransferase, class III -0.51

    Or look for positive cofitness