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  • Negative cofitness for GFF5016 from Variovorax sp. SCN45

    ATP-dependent RNA helicase RhlE (EC 3.6.4.13)
    SEED: ATP-dependent RNA helicase RhlE

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1413 hypothetical protein -0.57
    2 GFF5193 Galactofuranose ABC transporter, substrate-binding protein -0.56
    3 GFF5106 Permease of the drug/metabolite transporter (DMT) superfamily -0.56
    4 GFF5233 General secretion pathway protein F / Type II secretory pathway, component PulF -0.55
    5 GFF4619 Altronate dehydratase (EC 4.2.1.7) -0.54
    6 GFF5994 Chlorogenate esterase -0.52
    7 GFF2692 hypothetical protein -0.52
    8 GFF3058 Demethylmenaquinone methyltransferase-like protein -0.52
    9 GFF4073 Copper tolerance protein -0.51
    10 GFF4598 Efflux ABC transporter, permease/ATP-binding protein mlr7818 -0.51
    11 GFF804 Fumarylacetoacetate hydrolase family protein -0.51
    12 GFF5938 T6SS component TssF (ImpG/VasA) -0.50
    13 GFF5836 no description -0.49
    14 GFF6588 Glyoxylate carboligase (EC 4.1.1.47) -0.49
    15 GFF6200 integral membrane sensor signal transduction histidine kinase -0.48
    16 GFF1437 Transcriptional regulator, LysR family -0.48
    17 GFF4771 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) -0.48
    18 GFF2907 Glucarate dehydratase (EC 4.2.1.40) -0.48
    19 GFF4521 Guanine deaminase (EC 3.5.4.3) -0.48
    20 GFF2683 Protein containing domains DUF404, DUF407 -0.48

    Or look for positive cofitness