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  • Negative cofitness for PS417_02555 from Pseudomonas simiae WCS417

    exoribonuclease R
    SEED: 3'-to-5' exoribonuclease RNase R
    KEGG: ribonuclease R

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_23890 ATPase -0.29
    2 PS417_04935 hypothetical protein -0.29
    3 PS417_04070 porin -0.27
    4 PS417_25790 aminoglycoside phosphotransferase -0.26
    5 PS417_19335 isochorismatase -0.26
    6 PS417_27445 membrane protein -0.24
    7 PS417_24745 gamma-glutamyl phosphate reductase -0.24
    8 PS417_20520 3-phosphoglycerate kinase -0.24
    9 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase -0.24
    10 PS417_04860 ATPase -0.24
    11 PS417_24210 dolichyl-phosphate-mannose-protein mannosyltransferase -0.23
    12 PS417_08205 acetyltransferase -0.23
    13 PS417_08315 hypothetical protein -0.23
    14 PS417_00305 cytochrome oxidase subunit I -0.23
    15 PS417_03970 1-phosphofructokinase -0.23
    16 PS417_18825 TetR family transcriptional regulator -0.22
    17 PS417_13455 alkaline proteinase inhibitor -0.22
    18 PS417_03925 nicotinate-nucleotide pyrophosphorylase -0.22
    19 PS417_00445 histidine kinase -0.22
    20 PS417_12325 precorrin-4 C11-methyltransferase -0.22

    Or look for positive cofitness