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  • Negative cofitness for GFF50 from Variovorax sp. SCN45

    Murein hydrolase activator NlpD
    KEGG: lipoprotein NlpD

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5248 Outer membrane porin protein 32 precursor -0.62
    2 GFF5409 FIG00576366: hypothetical protein -0.59
    3 GFF7374 FIG00984748: hypothetical protein -0.56
    4 GFF6086 Putative short-chain dehydrogenase -0.53
    5 GFF1768 FIG00729359: hypothetical protein -0.53
    6 GFF6409 Histidine ammonia-lyase (EC 4.3.1.3) -0.52
    7 GFF4217 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) -0.52
    8 GFF7375 Arginine:pyruvate transaminase -0.52
    9 GFF3553 FOG: TPR repeat -0.52
    10 GFF5478 hypothetical protein -0.51
    11 GFF2388 hypothetical protein -0.51
    12 GFF4413 CopG domain-containing protein -0.51
    13 GFF3668 hypothetical protein -0.50
    14 GFF5150 Taurine ABC transporter, permease protein TauC -0.50
    15 GFF5727 Methyl-accepting chemotaxis sensor/transducer protein -0.50
    16 GFF6635 FIG00441227: hypothetical protein -0.49
    17 GFF2194 Tol-Pal system peptidoglycan-associated lipoprotein PAL -0.49
    18 GFF1086 putative Glutathione-regulated potassium-efflux system protein KefB -0.49
    19 GFF2360 GGDEF domain protein -0.49
    20 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) -0.49

    Or look for positive cofitness