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  • Negative cofitness for GFF4963 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3013 KEGG: type VI secretion system secreted protein Hcp -0.53
    2 GFF5329 SAM-dependent methyltransferase -0.51
    3 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component -0.49
    4 GFF2583 putative lipoprotein -0.49
    5 GFF6611 Transcriptional regulator, Xre family -0.48
    6 GFF5755 Flagellar biosynthesis protein FliS -0.47
    7 GFF3906 Acyl-CoA dehydrogenase -0.47
    8 GFF4853 Transcriptional regulator, LysR family -0.46
    9 GFF5052 FAD-dependent oxidoreductase SPO0682 -0.46
    10 GFF3284 hypothetical protein -0.46
    11 GFF865 hypothetical protein -0.45
    12 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) -0.45
    13 GFF5433 Oxidoreductase, short-chain dehydrogenase/reductase family -0.44
    14 GFF6077 G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27) -0.44
    15 GFF7120 Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB -0.44
    16 GFF432 Probable transcription regulator protein of MDR efflux pump cluster -0.44
    17 GFF5271 Transcriptional regulator, LysR family -0.44
    18 GFF2637 no description -0.44
    19 GFF6836 hypothetical protein -0.44
    20 GFF456 Transcriptional regulator, AraC family -0.43

    Or look for positive cofitness