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  • Negative cofitness for GFF496 from Variovorax sp. SCN45

    Squalene synthase (EC 2.5.1.21)
    SEED: Phytoene synthase (EC 2.5.1.32)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3289 Putative phosphoesterase -0.62
    2 GFF2575 Quinolinate synthetase (EC 2.5.1.72) -0.56
    3 GFF937 Biotin synthase (EC 2.8.1.6) -0.55
    4 GFF4530 MBL-fold metallo-hydrolase superfamily -0.55
    5 GFF3909 Aconitate hydratase (EC 4.2.1.3) -0.54
    6 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) -0.54
    7 GFF2027 2-hydroxychromene-2-carboxylate isomerase family protein -0.54
    8 GFF767 Alpha-amylase (EC 3.2.1.1) -0.49
    9 GFF6768 hypothetical protein -0.49
    10 GFF2762 Glutamine ABC transporter, substrate-binding protein GlnH -0.49
    11 GFF6403 Stresses-induced protein Ves (HutD) -0.49
    12 GFF6138 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 -0.48
    13 GFF5298 FIG01204242: hypothetical protein -0.48
    14 GFF4422 Conjugative transfer protein TrbG -0.48
    15 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) -0.47
    16 GFF305 uncharacterized domain / RidA/YER057c/UK114 superfamily, group 5 -0.47
    17 GFF4772 D-mannose isomerase (EC 5.3.1.7) -0.46
    18 GFF325 Nucleoside ABC transporter, substrate-binding protein -0.46
    19 GFF5510 protein of unknown function DUF306, Meta and HslJ -0.45
    20 GFF3946 Probable low-affinity inorganic phosphate transporter -0.45

    Or look for positive cofitness