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  • Negative cofitness for GFF4958 from Variovorax sp. SCN45

    ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4117 Translation elongation factor Tu -0.57
    2 GFF2593 Integral membrane protein -0.54
    3 GFF4987 3-fumarylpyruvate hydrolase (EC 3.7.1.20) -0.52
    4 GFF5529 Putative outer membrane protein -0.52
    5 GFF3558 hypothetical protein -0.51
    6 GFF4375 FIG00463055: hypothetical protein -0.51
    7 GFF6153 Transcriptional activator of acetoin/glycerol metabolism -0.51
    8 GFF7225 hypothetical protein -0.51
    9 GFF5718 Flagellar hook protein FlgE -0.50
    10 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) -0.50
    11 GFF7159 Putative reductase -0.49
    12 GFF6734 Transcriptional regulator, AraC family -0.49
    13 GFF5579 probable bifunctional hydroxylase/oxidoreductase -0.49
    14 GFF1507 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.49
    15 GFF6545 Uncharacterized MFS-type transporter -0.48
    16 GFF6743 no description -0.48
    17 GFF2903 no description -0.48
    18 GFF6103 no description -0.47
    19 GFF315 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase -0.47
    20 GFF111 hypothetical protein -0.47

    Or look for positive cofitness