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  • Negative cofitness for GFF4945 from Variovorax sp. SCN45

    probable GntR-family transcriptional regulator
    SEED: probable GntR-family transcriptional regulator
    KEGG: GntR family transcriptional regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain -0.71
    2 GFF2649 putative autotransporter protein -0.70
    3 GFF4377 putative plasmid stabilization protein -0.65
    4 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) -0.65
    5 GFF5455 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) -0.64
    6 GFF5295 Ferrichrome-iron receptor -0.62
    7 GFF4252 hypothetical protein -0.61
    8 GFF5496 BUG/TctC family periplasmic protein -0.61
    9 GFF1295 FIG00455815: hypothetical protein -0.61
    10 GFF6562 T1SS secreted agglutinin RTX -0.60
    11 GFF2738 hypothetical protein -0.60
    12 GFF6515 no description -0.60
    13 GFF4426 Homolog of eukaryotic DNA ligase III -0.59
    14 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) -0.59
    15 GFF7375 Arginine:pyruvate transaminase -0.58
    16 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) -0.57
    17 GFF994 Cytoskeleton protein RodZ -0.57
    18 GFF5393 mandelate racemase/muconate lactonizing enzyme family protein -0.57
    19 GFF4720 Putrescine transport system permease protein potI -0.57
    20 GFF4397 hypothetical protein -0.57

    Or look for positive cofitness