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  • Negative cofitness for GFF4891 from Variovorax sp. SCN45

    FIG00975719: hypothetical protein
    SEED: FIG00975719: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO -0.56
    2 GFF6742 NAD(P)H-flavin oxidoreductase -0.52
    3 GFF2011 hypothetical protein -0.49
    4 GFF6467 Nucleoside-diphosphate-sugar epimerases -0.49
    5 GFF4873 no description -0.48
    6 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain -0.46
    7 GFF881 Transcriptional regulator ligR, LysR family -0.45
    8 GFF4721 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) -0.45
    9 GFF6667 hypothetical protein -0.45
    10 GFF1566 no description -0.43
    11 GFF634 Urea ABC transporter, permease protein UrtC -0.43
    12 GFF1990 Transcriptional regulator, MerR family -0.43
    13 GFF3954 Similar to cobalamin biosynthesis protein CbiB -0.43
    14 GFF5265 Outer membrane lipoprotein -0.43
    15 GFF20 hypothetical protein -0.42
    16 GFF5922 T6SS forkhead associated domain protein ImpI/VasC -0.42
    17 GFF6868 SAM-dependent methyltransferase -0.42
    18 GFF199 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA -0.42
    19 GFF101 Phosphate-binding DING protein (related to PstS) -0.41
    20 GFF3769 FIG022979: MoxR-like ATPases -0.41

    Or look for positive cofitness