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  • Negative cofitness for GFF4862 from Variovorax sp. SCN45

    Alpha-methylacyl-CoA racemase (EC 5.1.99.4)
    SEED: Alpha-methylacyl-CoA racemase (EC 5.1.99.4)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4910 hypothetical protein -0.61
    2 GFF4664 hypothetical protein -0.56
    3 GFF626 CzcABC family efflux RND transporter, transmembrane protein -0.55
    4 GFF1042 Glutathione S-transferase, unnamed subgroup 2 (EC 2.5.1.18) -0.52
    5 GFF4413 CopG domain-containing protein -0.51
    6 GFF2959 Uncharacterized protein YfaP -0.51
    7 GFF3695 hypothetical protein -0.51
    8 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.50
    9 GFF4154 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.50
    10 GFF4217 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) -0.49
    11 GFF39 Transcriptional regulator, LysR family -0.49
    12 GFF1630 Esterase/lipase -0.49
    13 GFF3017 T6SS AAA+ chaperone ClpV (TssH) -0.49
    14 GFF26 Esterase/lipase -0.48
    15 GFF5031 ABC-type spermidine/putrescine transport systems, ATPase components -0.48
    16 GFF6650 no description -0.48
    17 GFF4705 Monooxygenase, flavin-binding family -0.48
    18 GFF567 KEGG: type IV fimbrial biogenesis protein FimT -0.47
    19 GFF2946 Regulator of competence-specific genes -0.47
    20 GFF3437 putative membrane protein -0.47

    Or look for positive cofitness