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  • Negative cofitness for GFF4856 from Variovorax sp. SCN45

    3-methylmercaptopropionyl-CoA dehydrogenase (DmdC)
    SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4782 Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II) -0.57
    2 GFF1793 hypothetical protein -0.55
    3 GFF5767 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) -0.53
    4 GFF5004 N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) -0.52
    5 GFF7415 no description -0.51
    6 GFF1930 RTX toxin transporter, ATP-binding protein -0.51
    7 GFF3671 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.50
    8 GFF2747 17 kDa surface antigen -0.50
    9 GFF1257 Organosulfonate utilization protein SsuF -0.49
    10 GFF6639 no description -0.49
    11 GFF5195 L-arabinose ABC transporter, ATP-binding protein AraG -0.49
    12 GFF6221 T6SS associated component TagF (ImpM) -0.49
    13 GFF807 FIG00003370: Multicopper polyphenol oxidase -0.48
    14 GFF2706 VgrG protein -0.48
    15 GFF2181 no description -0.47
    16 GFF6341 no description -0.47
    17 GFF5168 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases -0.46
    18 GFF7016 FAD-dependent oxidoreductase -0.46
    19 GFF5122 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination -0.46
    20 GFF1572 Transcriptional regulator, LysR family -0.45

    Or look for positive cofitness