Negative cofitness for GFF4847 from Variovorax sp. SCN45

Conjugative transfer protein TrbD
SEED: Conjugative transfer protein TrbD
KEGG: type IV secretion system protein VirB3

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	GFF545		hypothetical protein	-0.56
2	GFF5872		Inner membrane protein YbhQ	-0.53
3	GFF1507		ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)	-0.52
4	GFF4372		ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)	-0.52
5	GFF3827		UPF0118 membrane protein SMc00793	-0.50
6	GFF7106		BUG/TctC family periplasmic protein	-0.50
7	GFF4310		Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	-0.49
8	GFF6338		no description	-0.49
9	GFF3665		no description	-0.48
10	GFF1099		Na+-driven multidrug efflux pump	-0.48
11	GFF6258		Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase (EC 4.7.1.1)	-0.48
12	GFF356		L-asparaginase (EC 3.5.1.1)	-0.48
13	GFF717		Enoyl-CoA hydratase (EC 4.2.1.17)	-0.47
14	GFF3428		2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)	-0.47
15	GFF482		Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1)	-0.47
16	GFF6498		FIG00348192: hypothetical protein	-0.46
17	GFF6627		Mobile element protein	-0.46
18	GFF4947		Erythritol kinase EryA (EC 2.7.1.27)	-0.46
19	GFF4720		Putrescine transport system permease protein potI	-0.46
20	GFF1767		no description	-0.46

Or look for positive cofitness