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  • Negative cofitness for GFF4841 from Variovorax sp. SCN45

    Conjugative transfer protein TrbI
    SEED: Conjugative transfer protein TrbI
    KEGG: type IV secretion system protein VirB10

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3557 hypothetical protein -0.62
    2 GFF5188 no description -0.54
    3 GFF6757 no description -0.53
    4 GFF4858 Transposase -0.51
    5 GFF3053 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) -0.51
    6 GFF2436 no description -0.50
    7 GFF2211 Flp pilus assembly protein RcpC/CpaB -0.50
    8 GFF5047 hypothetical protein -0.50
    9 GFF1948 Phage integrase -0.50
    10 GFF4135 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme -0.49
    11 GFF3300 hypothetical protein -0.49
    12 GFF4465 Transcriptional regulator, LysR family -0.49
    13 GFF6344 HipA-like -0.48
    14 GFF2681 Phosphoethanolamine transferase EptC [E.coli], specific for LPS heptose I residue -0.48
    15 GFF2236 hypothetical protein -0.47
    16 GFF5480 no description -0.47
    17 GFF225 Permeases of the major facilitator superfamily -0.47
    18 GFF2666 Membrane-bound lytic murein transglycosylase B -0.47
    19 GFF4918 hypothetical protein -0.47
    20 GFF5473 hypothetical protein -0.46

    Or look for positive cofitness