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  • Negative cofitness for GFF4818 from Variovorax sp. SCN45

    Hydroxymethylpyrimidine ABC transporter, substrate-binding component
    SEED: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF602 Transcriptional regulator, LysR family => TcuR -0.57
    2 GFF5736 Flagellar hook-associated protein FlgL -0.53
    3 GFF3795 Flagellar hook-length control protein FliK -0.53
    4 GFF3146 no description -0.52
    5 GFF334 Transcriptional regulator, AraC family -0.51
    6 GFF1112 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.50
    7 GFF6391 RfbJ protein -0.49
    8 GFF1817 5-hydroxyisourate hydrolase (EC 3.5.2.17) -0.49
    9 GFF4121 no description -0.47
    10 GFF6503 no description -0.47
    11 GFF3542 hypothetical protein -0.46
    12 GFF710 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) -0.46
    13 GFF1658 Transcriptional regulator, LysR family -0.46
    14 GFF2701 CaiB/BaiF family protein -0.46
    15 GFF6983 FIG140336: TPR domain protein -0.46
    16 GFF7357 Phenylacetate ABC transporter, ATP-binding protein 1 -0.45
    17 GFF5614 hypothetical protein -0.45
    18 GFF3937 Transcriptional regulator, AraC family -0.45
    19 GFF5293 N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87) -0.45
    20 GFF6045 FIG00932121: hypothetical protein -0.45

    Or look for positive cofitness