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  • Negative cofitness for GFF4811 from Variovorax sp. SCN45

    FIG074102: hypothetical protein
    SEED: FIG074102: hypothetical protein
    KEGG: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3937 Transcriptional regulator, AraC family -0.61
    2 GFF2268 Protein of unknown function DUF1428 -0.55
    3 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) -0.53
    4 GFF4544 RNA polymerase sigma factor RpoE -0.53
    5 GFF5226 Probable cytochrome c2 -0.53
    6 GFF5736 Flagellar hook-associated protein FlgL -0.52
    7 GFF1148 hypothetical protein -0.52
    8 GFF3504 BUG/TctC family periplasmic protein -0.52
    9 GFF2941 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) -0.51
    10 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain -0.51
    11 GFF4272 BUG/TctC family periplasmic protein -0.49
    12 GFF1465 ABC transporter spermidine/putrescine-binding protein -0.49
    13 GFF685 Tricarboxylate transport protein TctC -0.48
    14 GFF2416 Transcriptional regulator YbhD, LysR family -0.48
    15 GFF6839 hypothetical protein -0.47
    16 GFF4898 no description -0.47
    17 GFF3908 FIG00582414: hypothetical protein -0.47
    18 GFF1363 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.46
    19 GFF585 no description -0.46
    20 GFF1828 phosphodiesterase I -0.46

    Or look for positive cofitness