• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF4776 from Variovorax sp. SCN45

    Broad-specificity amino acid ABC transporter, substrate-binding protein
    SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5409 FIG00576366: hypothetical protein -0.65
    2 GFF146 hypothetical protein -0.58
    3 GFF1007 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) -0.58
    4 GFF3386 hypothetical protein -0.55
    5 GFF2275 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) -0.55
    6 GFF6861 no description -0.54
    7 GFF4646 Magnesium and cobalt transport protein CorA -0.53
    8 GFF6282 23S rRNA (guanine(2445)-N(2))-methyltransferase (EC 2.1.1.173) -0.52
    9 GFF5087 DNA repair protein RadA -0.52
    10 GFF3668 hypothetical protein -0.52
    11 GFF7374 FIG00984748: hypothetical protein -0.52
    12 GFF6635 FIG00441227: hypothetical protein -0.51
    13 GFF6950 Acetoacetyl-CoA reductase (EC 1.1.1.36) -0.51
    14 GFF5847 putative membrane protein -0.50
    15 GFF4483 ATP-dependent hsl protease ATP-binding subunit HslU -0.50
    16 GFF4418 Conjugative transfer protein TrbJ -0.50
    17 GFF225 Permeases of the major facilitator superfamily -0.49
    18 GFF6491 SAM-dependent methyltransferase -0.49
    19 GFF6918 Transcriptional regulator, AraC family -0.49
    20 GFF1268 FIG022199: FAD-binding protein -0.49

    Or look for positive cofitness