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  • Negative cofitness for PS417_24100 from Pseudomonas simiae WCS417

    transcriptional regulator PdhR
    SEED: Lactate-responsive regulator LldR in Enterobacteria, GntR family
    KEGG: GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_24570 AsnC family transcriptional regulator -0.25
    2 PS417_11460 divalent metal cation transporter MntH -0.24
    3 PS417_18390 LacI family transcriptional regulator -0.23
    4 PS417_07515 aconitate hydratase -0.23
    5 PS417_08865 large component of pyruvate transporter (actP-like) (from data) -0.22
    6 PS417_25405 catalase -0.22
    7 PS417_15075 NAD-glutamate dehydrogenase -0.21
    8 PS417_24295 carbon starvation protein A -0.21
    9 PS417_00440 N-acetylmuramoyl-L-alanine amidase -0.21
    10 PS417_01780 proline iminopeptidase -0.20
    11 PS417_17085 fimbrial assembly protein -0.20
    12 PS417_09595 membrane protein -0.20
    13 PS417_05300 glucose dehydrogenase -0.19
    14 PS417_09620 lipopolysaccharide biosynthesis protein -0.19
    15 PS417_27245 aminotransferase DegT -0.19
    16 PS417_26500 thioesterase -0.19
    17 PS417_20920 D-alanyl-D-alanine carboxypeptidase -0.19
    18 PS417_27865 LysR family transcriptional regulator -0.18
    19 PS417_18175 MFS transporter -0.18
    20 PS417_13870 hypothetical protein -0.18

    Or look for positive cofitness