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  • Negative cofitness for GFF4687 from Sphingobium sp. HT1-2

    Protein often near L-alanine-DL-glutamate epimerase (cell wall recycling)
    SEED: Protein often near L-alanine-DL-glutamate epimerase (cell wall recycling)

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3968 hypothetical protein -0.68
    2 GFF4156 hypothetical protein -0.68
    3 GFF1507 Glycine-rich cell wall structural protein precursor -0.64
    4 GFF3987 hypothetical protein -0.64
    5 GFF2383 tRNA-Ala-CGC -0.64
    6 GFF954 Regulatory protein LuxR -0.63
    7 GFF1838 Aldo/keto reductase, SMc04056 family -0.63
    8 GFF3178 protein of unknown function DUF498 -0.63
    9 GFF335 hypothetical protein -0.63
    10 GFF3588 hypothetical protein -0.59
    11 GFF736 hypothetical protein -0.59
    12 GFF1406 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) -0.59
    13 GFF1372 COGs COG3777 -0.58
    14 GFF892 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4) -0.58
    15 GFF4304 IncF plasmid conjugative transfer pilus assembly protein TraU -0.57
    16 GFF5209 hypothetical protein -0.56
    17 GFF2077 Pyruvate dehydrogenase E1 component alpha subunit (EC 1.2.4.1) -0.56
    18 GFF90 Molybdenum cofactor biosynthesis protein MoaB -0.55
    19 GFF4169 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) -0.55
    20 GFF2902 HtrA protease/chaperone protein -0.55

    Or look for positive cofitness