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  • Negative cofitness for GFF468 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: LysR family transcriptional regulator PA2877

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1884 Gluconokinase (EC 2.7.1.12) -0.51
    2 GFF6440 Molybdate-binding domain of ModE -0.50
    3 GFF1284 Transcriptional regulator, LysR family -0.47
    4 GFF6988 Flagellar hook protein FlgE -0.46
    5 GFF4915 hypothetical protein -0.44
    6 GFF7159 Putative reductase -0.44
    7 GFF6016 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) -0.43
    8 GFF2729 hypothetical protein -0.43
    9 GFF3767 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases -0.43
    10 GFF2742 Metal-dependent hydrolases of the beta-lactamase superfamily I -0.42
    11 GFF1722 hypothetical protein -0.42
    12 GFF4883 Translation-disabling ACNase RloC -0.42
    13 GFF4216 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.42
    14 GFF4987 3-fumarylpyruvate hydrolase (EC 3.7.1.20) -0.42
    15 GFF5851 TPR repeat -0.42
    16 GFF6498 FIG00348192: hypothetical protein -0.41
    17 GFF2103 Regulatory protein, LuxR:Tetratricopeptide TPR_4 -0.41
    18 GFF1728 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) -0.41
    19 GFF456 Transcriptional regulator, AraC family -0.41
    20 GFF6517 Cation transport protein ChaC -0.41

    Or look for positive cofitness