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  • Negative cofitness for PS417_23815 from Pseudomonas simiae WCS417

    pseudouridine synthase
    SEED: Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_03045 hypothetical protein -0.21
    2 PS417_04225 conjugal transfer protein TraR -0.20
    3 PS417_25955 LysR family transcriptional regulator -0.19
    4 PS417_17565 branched-chain amino acid aminotransferase -0.19
    5 PS417_16495 leucyl/phenylalanyl-tRNA--protein transferase -0.19
    6 PS417_08075 methionine ABC transporter ATP-binding protein -0.18
    7 PS417_09790 hypothetical protein -0.18
    8 PS417_17545 2-oxoisovalerate dehydrogenase -0.18
    9 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) -0.18
    10 PS417_18000 hypothetical protein -0.18
    11 PS417_22505 mechanosensitive ion channel protein MscS -0.18
    12 PS417_27875 histidine kinase -0.17
    13 PS417_08540 RNA helicase -0.17
    14 PS417_23890 ATPase -0.16
    15 PS417_27585 diaminopimelate epimerase -0.16
    16 PS417_04060 dipeptide ABC transporter, permease component (from data) -0.16
    17 PS417_20620 glycosyl transferase family 2 -0.16
    18 PS417_07110 hypothetical protein -0.16
    19 PS417_01390 PbsX family transcriptional regulator -0.15
    20 PS417_21070 aconitate hydratase -0.15

    Or look for positive cofitness