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  • Negative cofitness for PS417_23740 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: FIG000557: hypothetical protein co-occurring with RecR

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_00335 cytochrome B561 -0.37
    2 PS417_27535 chemotaxis protein CheY -0.34
    3 PS417_14920 CoA-transferase -0.33
    4 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase -0.33
    5 PS417_22125 porin -0.32
    6 PS417_01710 histidine utilization repressor -0.32
    7 PS417_00305 cytochrome oxidase subunit I -0.31
    8 PS417_18390 LacI family transcriptional regulator -0.30
    9 PS417_00300 cytochrome B559 subunit alpha -0.30
    10 PS417_08345 chemotaxis protein -0.30
    11 PS417_16005 ATPase -0.30
    12 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase -0.30
    13 PS417_24835 hypothetical protein -0.30
    14 PS417_24295 carbon starvation protein A -0.29
    15 PS417_25835 hypothetical protein -0.29
    16 PS417_13805 4-amino-4-deoxy-L-arabinose transferase -0.28
    17 PS417_13820 UDP-glucose 6-dehydrogenase -0.28
    18 PS417_24290 hypothetical protein -0.28
    19 PS417_04340 ribosome hibernation promoting factor HPF -0.27
    20 PS417_04195 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) -0.27

    Or look for positive cofitness