• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF4610 from Variovorax sp. SCN45

    Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8)
    SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B -0.69
    2 GFF5623 Metal-dependent amidase/aminoacylase/carboxypeptidase -0.62
    3 GFF4955 hypothetical protein -0.60
    4 GFF3314 FIG00349255: hypothetical protein -0.58
    5 GFF6200 integral membrane sensor signal transduction histidine kinase -0.57
    6 GFF6162 Dihydrodipicolinate synthase family protein RB7999 -0.57
    7 GFF6278 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) -0.57
    8 GFF326 Polysaccharide deacetylase, caspase activity -0.56
    9 GFF288 no description -0.55
    10 GFF4396 Mobile element protein -0.55
    11 GFF6210 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.55
    12 GFF5705 Transcriptional regulator, AcrR family -0.55
    13 GFF6458 Lipid A 4'-phosphatase LpxF-like, putative -0.54
    14 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) -0.54
    15 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) -0.54
    16 GFF4644 no description -0.52
    17 GFF6395 hypothetical protein -0.52
    18 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) -0.52
    19 GFF7004 Flagellar biosynthesis protein FlhA -0.51
    20 GFF6392 hypothetical protein -0.51

    Or look for positive cofitness