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  • Negative cofitness for GFF4598 from Variovorax sp. SCN45

    Efflux ABC transporter, permease/ATP-binding protein mlr7818
    SEED: Lipid A export ATP-binding/permease protein MsbA
    KEGG: ATP-binding cassette, subfamily B, bacterial

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5365 Outer membrane stress sensor protease DegS -0.55
    2 GFF3100 Aspartyl protease -0.55
    3 GFF1126 Metal transporter, ZIP family -0.55
    4 GFF7010 no description -0.54
    5 GFF628 hypothetical protein -0.53
    6 GFF4719 hypothetical protein -0.52
    7 GFF4744 Permease of the drug/metabolite transporter (DMT) superfamily -0.51
    8 GFF3219 hypothetical protein -0.51
    9 GFF5016 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) -0.51
    10 GFF11 Two-component transcriptional response regulator, OmpR family -0.50
    11 GFF4430 hypothetical protein -0.49
    12 GFF1418 Transcriptional regulator, LysR family -0.47
    13 GFF3948 Acetyltransferase, GNAT family -0.47
    14 GFF2584 Sulfate permease -0.47
    15 GFF2956 Uncharacterized protein YfaT -0.46
    16 GFF2487 Two-component system sensor histidine kinase/response regulator hybrid -0.45
    17 GFF6971 no description -0.45
    18 GFF350 Ferric siderophore transport system, biopolymer transport protein ExbB -0.45
    19 GFF1072 no description -0.45
    20 GFF3106 Hydrolase, alpha/beta fold family -0.45

    Or look for positive cofitness