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  • Negative cofitness for GFF4582 from Variovorax sp. SCN45

    TRAP-type C4-dicarboxylate transport system, small permease component
    SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2101 no description -0.71
    2 GFF1874 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) -0.62
    3 GFF2617 no description -0.61
    4 GFF4328 hypothetical protein -0.60
    5 GFF5917 T6SS component TssB (ImpB/VipA) -0.59
    6 GFF6870 FIG00904791: hypothetical protein -0.57
    7 GFF624 hypothetical protein -0.57
    8 GFF2227 Tricarboxylate transport protein TctC -0.56
    9 GFF5247 hypothetical protein -0.55
    10 GFF4215 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ -0.55
    11 GFF3147 hypothetical protein -0.55
    12 GFF5897 hypothetical protein -0.54
    13 GFF3018 VgrG protein -0.54
    14 GFF1372 Uncharacterized MFS-type transporter -0.54
    15 GFF4166 Cytidine deaminase (EC 3.5.4.5) -0.54
    16 GFF1792 Transcriptional regulator, IclR family -0.53
    17 GFF3297 hypothetical protein Ajs_0007 -0.53
    18 GFF6872 FIG00904907: hypothetical protein -0.52
    19 GFF348 Superoxide dismutase [Fe] (EC 1.15.1.1) -0.52
    20 GFF6382 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.52

    Or look for positive cofitness