• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF4569 from Variovorax sp. SCN45

    3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
    SEED: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
    KEGG: acetyl-CoA C-acetyltransferase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3704 FIG00536957: hypothetical protein -0.58
    2 GFF1566 no description -0.57
    3 GFF3610 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.55
    4 GFF881 Transcriptional regulator ligR, LysR family -0.54
    5 GFF4822 Thiamine pyrophosphate-requiring enzymes -0.53
    6 GFF1222 Methylglyoxal synthase (EC 4.2.3.3) -0.50
    7 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) -0.49
    8 GFF2249 no description -0.49
    9 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO -0.48
    10 GFF690 Transcriptional regulator, IclR family -0.48
    11 GFF5644 Selenophosphate-dependent tRNA 2-selenouridine synthase -0.48
    12 GFF3578 Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18) -0.48
    13 GFF3146 no description -0.47
    14 GFF4332 Aldehyde dehydrogenase (EC 1.2.1.3) -0.47
    15 GFF1669 hypothetical protein -0.46
    16 GFF2332 Transcriptional regulator, LysR family -0.46
    17 GFF6396 hypothetical protein -0.46
    18 GFF5377 Transcriptional regulator, AcrR family -0.46
    19 GFF6719 hypothetical protein -0.46
    20 GFF92 KEGG: general secretion pathway protein I -0.46

    Or look for positive cofitness