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  • Negative cofitness for GFF4554 from Variovorax sp. SCN45

    Protease HtpX
    SEED: Heat shock protease
    KEGG: heat shock protein HtpX

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2779 Transcriptional regulator, AraC family -0.50
    2 GFF1705 ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) / C-terminal AAA-associated domain -0.47
    3 GFF436 LrgA-associated membrane protein LrgB -0.46
    4 GFF1888 BUG/TctC family periplasmic protein -0.46
    5 GFF4007 Glutamate carboxypeptidase (EC 3.4.17.11) -0.45
    6 GFF3199 Ser/Thr protein phosphatase family protein -0.45
    7 GFF3512 no description -0.45
    8 GFF6890 Threonine efflux protein -0.44
    9 GFF6966 Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) -0.44
    10 GFF6739 Putative diheme cytochrome c-553 -0.43
    11 GFF322 GTP cyclohydrolase II homolog -0.42
    12 GFF5999 DNA polymerase IV (EC 2.7.7.7) -0.42
    13 GFF3961 ATP-dependent RNA helicase NGO0650 -0.42
    14 GFF3056 Nitrogen assimilation regulatory protein Nac -0.42
    15 GFF4989 Transcriptional regulator, LysR family -0.41
    16 GFF5827 FIG00452956: hypothetical protein -0.41
    17 GFF5857 Fe2+-dicitrate sensor, membrane component -0.41
    18 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.40
    19 GFF1698 BUG/TctC family periplasmic protein -0.40
    20 GFF5812 DNA-binding heavy metal response regulator -0.40

    Or look for positive cofitness