• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF4554 from Sphingobium sp. HT1-2

    Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
    SEED: Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
    KEGG: pilus assembly protein CpaF

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3262 FeoA -0.76
    2 GFF406 hypothetical protein -0.76
    3 GFF3678 hypothetical protein -0.75
    4 GFF395 hypothetical protein -0.72
    5 GFF4416 Transcriptional regulator, ArsR family -0.70
    6 GFF2915 hypothetical protein -0.69
    7 GFF4749 hypothetical protein -0.67
    8 GFF102 Proline iminopeptidase (EC 3.4.11.5) -0.67
    9 GFF3096 Outer membrane component of TAM transport system -0.66
    10 GFF4202 hypothetical protein -0.66
    11 GFF3397 hypothetical protein -0.66
    12 GFF1081 hypothetical protein -0.65
    13 GFF1249 Capsular polysaccharide biosynthesis protein -0.64
    14 GFF2005 TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain -0.64
    15 GFF241 hypothetical protein -0.63
    16 GFF2214 hypothetical protein -0.63
    17 GFF1085 Phage integrase -0.63
    18 GFF922 Enoyl-CoA hydratase (EC 4.2.1.17) -0.63
    19 GFF2254 DksA family protein PA5536 (no Zn-finger) -0.63
    20 GFF957 Transcriptional regulator, LysR family -0.63

    Or look for positive cofitness