Negative cofitness for GFF4544 from Variovorax sp. SCN45

RNA polymerase sigma factor RpoE
SEED: RNA polymerase sigma factor RpoE
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF4811 FIG074102: hypothetical protein -0.53
2 GFF2453 NAD-dependent dihydropyrimidine dehydrogenase subunit PreT (EC 1.3.1.1) -0.53
3 GFF1765 putative membrane protein -0.51
4 GFF5828 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) -0.50
5 GFF3384 Transcriptional regulator, Crp/Fnr family -0.49
6 GFF6143 2-aminoethylphosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) -0.49
7 GFF4138 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.48
8 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination -0.48
9 GFF4070 no description -0.48
10 GFF1707 no description -0.48
11 GFF774 no description -0.47
12 GFF3690 ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) -0.47
13 GFF4873 no description -0.47
14 GFF905 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) -0.47
15 GFF1959 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.46
16 GFF788 hypothetical protein -0.46
17 GFF3514 no description -0.45
18 GFF6641 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.45
19 GFF1990 Transcriptional regulator, MerR family -0.45
20 GFF3872 DNA recombination and repair protein RecO -0.45

Or look for positive cofitness