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  • Negative cofitness for PS417_23095 from Pseudomonas simiae WCS417

    exodeoxyribonuclease
    SEED: Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)
    KEGG: exodeoxyribonuclease VII large subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_26660 protein PilI -0.24
    2 PS417_04225 conjugal transfer protein TraR -0.20
    3 PS417_21830 TetR family transcriptional regulator -0.19
    4 PS417_01415 glycosyl transferase family 1 -0.19
    5 PS417_01420 histidine kinase -0.18
    6 PS417_25790 aminoglycoside phosphotransferase -0.18
    7 PS417_12810 diguanylate cyclase -0.18
    8 PS417_25675 membrane protein -0.18
    9 PS417_07300 LysR family transcriptional regulator -0.18
    10 PS417_26650 histidine kinase -0.18
    11 PS417_17705 LacI family transcriptional regulator -0.18
    12 PS417_01395 biofilm formation protein PelB -0.17
    13 PS417_01410 transporter -0.17
    14 PS417_21630 magnesium transporter -0.17
    15 PS417_05260 MFS transporter -0.17
    16 PS417_16195 AraC family transcriptional regulator -0.16
    17 PS417_16515 Clp protease ClpS -0.16
    18 PS417_26245 hypothetical protein -0.16
    19 PS417_22015 hypothetical protein -0.16
    20 PS417_23690 Anthranilate 1,2-dioxygenase (deaminating, decarboxylating) (EC 1.14.12.1) (from data) -0.16

    Or look for positive cofitness