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  • Negative cofitness for GFF4504 from Variovorax sp. SCN45

    FIG00953527: hypothetical protein
    SEED: FIG00953527: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7076 no description -0.59
    2 GFF2531 Transcriptional regulator, AsnC family -0.51
    3 GFF5648 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) -0.50
    4 GFF4546 Permease of the drug/metabolite transporter (DMT) superfamily -0.49
    5 GFF1265 cAMP-binding protein -0.49
    6 GFF4131 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.49
    7 GFF3442 RidA/YER057c/UK114 superfamily protein -0.47
    8 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) -0.47
    9 GFF1904 Uncharacterized MFS-type transporter -0.47
    10 GFF5399 Altronate dehydratase (EC 4.2.1.7) -0.46
    11 GFF2047 Polyhydroxyalkanoic acid synthase -0.46
    12 GFF1107 NAD(FAD)-utilizing dehydrogenases -0.45
    13 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) -0.45
    14 GFF564 hypothetical protein -0.45
    15 GFF3914 Ferrous iron transport peroxidase EfeB -0.45
    16 GFF2521 FIG00931781: hypothetical protein -0.44
    17 GFF5549 Hydrogen peroxide-inducible genes activator => OxyR -0.44
    18 GFF6543 Transcriptional regulator, LysR family -0.44
    19 GFF3584 hypothetical protein -0.44
    20 GFF6843 FIG00958542: hypothetical protein -0.44

    Or look for positive cofitness