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  • Negative cofitness for GFF4503 from Variovorax sp. SCN45

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6482 Transcriptional regulator, AcrR family -0.68
    2 GFF1556 Tricarboxylate transport protein TctC -0.61
    3 GFF6368 T6SS lysozyme-like component TssE -0.57
    4 GFF2091 Cobalt/zinc/cadmium resistance protein CzcD -0.55
    5 GFF5656 Formate dehydrogenase O gamma subunit (EC 1.2.1.2) -0.54
    6 GFF3940 putative membrane protein -0.53
    7 GFF1370 Transcriptional regulator associated with Tricarboxylic transport -0.53
    8 GFF2585 no description -0.52
    9 GFF3391 Chlorogenate esterase -0.51
    10 GFF1532 hypothetical protein -0.50
    11 GFF2908 BUG/TctC family periplasmic protein -0.50
    12 GFF365 Acyl-CoA dehydrogenase -0.50
    13 GFF1422 L-lactate dehydrogenase -0.49
    14 GFF799 Rrf2 family transcriptional regulator, group III -0.49
    15 GFF5201 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) -0.49
    16 GFF4943 Chloride channel protein -0.48
    17 GFF828 CobW GTPase involved in cobalt insertion for B12 biosynthesis -0.48
    18 GFF57 Putative polysaccharide export protein YccZ precursor -0.48
    19 GFF7138 ATP-dependent 23S rRNA helicase DbpA -0.48
    20 GFF3472 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) -0.47

    Or look for positive cofitness