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  • Negative cofitness for GFF4496 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: MFS permease

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter -0.65
    2 GFF6366 T6SS component TssG (ImpH/VasB) -0.57
    3 GFF1537 FIG01127817: hypothetical protein -0.57
    4 GFF6554 Putative ATP/GTP-binding protein -0.53
    5 GFF6355 T6SS secretion lipoprotein TssJ (VasD) -0.52
    6 GFF2405 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) -0.51
    7 GFF1602 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) -0.50
    8 GFF675 KEGG: 2'-5' RNA ligase -0.49
    9 GFF5142 no description -0.49
    10 GFF2120 Type IV fimbrial biogenesis protein PilX -0.48
    11 GFF1090 Phosphohistidine phosphatase SixA -0.47
    12 GFF6576 Conjugative transfer protein TrbE -0.47
    13 GFF2536 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) -0.46
    14 GFF771 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) -0.46
    15 GFF2788 FIG003461: hypothetical protein -0.46
    16 GFF2410 Intracellular protease -0.46
    17 GFF4221 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) -0.46
    18 GFF4267 Transcriptional regulator, AraC family -0.45
    19 GFF1948 Phage integrase -0.45
    20 GFF6715 Transcriptional regulator of RpiR family in catabolic operon -0.45

    Or look for positive cofitness