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  • Negative cofitness for GFF4425 from Sphingobium sp. HT1-2

    LysR-family transcriptional regulator similar to hydrogen peroxide-inducible genes activator
    SEED: Hydrogen peroxide-inducible genes activator
    KEGG: LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1406 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) -0.77
    2 GFF430 hypothetical protein -0.72
    3 GFF3386 Superoxide dismutase [Mn] (EC 1.15.1.1) -0.72
    4 GFF1085 Phage integrase -0.71
    5 GFF4314 IncF plasmid conjugative transfer pilus assembly protein TraK -0.71
    6 GFF3202 hypothetical protein -0.70
    7 GFF2620 hypothetical protein -0.68
    8 GFF2102 hypothetical protein -0.68
    9 GFF2843 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A -0.67
    10 GFF3006 hypothetical protein -0.66
    11 GFF1076 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.66
    12 GFF2730 Hexuronate transporter -0.66
    13 GFF2589 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) -0.65
    14 GFF3379 hypothetical protein -0.65
    15 GFF2868 4-oxalomesaconate hydratase (EC 4.2.1.83) -0.65
    16 GFF3779 hypothetical protein -0.65
    17 GFF2756 hypothetical protein -0.64
    18 GFF4854 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) -0.64
    19 GFF4575 GGDEF domain protein -0.63
    20 GFF3446 hypothetical protein -0.63

    Or look for positive cofitness