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  • Negative cofitness for PS417_22645 from Pseudomonas simiae WCS417

    C4-dicarboxylate ABC transporter
    SEED: Nitrogen regulation protein NR(I)
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_23915 pantoate--beta-alanine ligase -0.26
    2 PS417_19350 GTP cyclohydrolase -0.24
    3 PS417_28050 hypothetical protein -0.23
    4 PS417_27870 ATP-dependent DNA helicase RecG -0.22
    5 PS417_07555 ABC transporter ATPase -0.21
    6 PS417_03830 protein disaggregation chaperone -0.21
    7 PS417_21480 23S rRNA pseudouridylate synthase -0.21
    8 PS417_05270 3-oxoacyl-ACP reductase -0.21
    9 PS417_09610 beta-xylosidase -0.21
    10 PS417_03260 5S ribosomal RNA -0.20
    11 PS417_00045 glycerol acyltransferase -0.20
    12 PS417_18475 Pyrrolidone-carboxylate peptidase -0.20
    13 PS417_08170 capsular biosynthesis protein -0.20
    14 PS417_23385 cytochrome o ubiquinol oxidase subunit I -0.20
    15 PS417_06680 nuclease PIN -0.20
    16 PS417_09685 glucoamylase -0.19
    17 PS417_04295 peptidase PmbA -0.19
    18 PS417_02975 3-dehydroquinate dehydratase -0.19
    19 PS417_01955 peptidase -0.19
    20 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase -0.19

    Or look for positive cofitness