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  • Negative cofitness for GFF4411 from Variovorax sp. SCN45

    Conjugative transfer protein TrbK
    SEED: probable lipoprotein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4943 Chloride channel protein -0.57
    2 GFF3027 T6SS component TssK (ImpJ/VasE) -0.55
    3 GFF4334 Enoyl-CoA hydratase (EC 4.2.1.17) -0.54
    4 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) -0.54
    5 GFF5780 Positive regulator of L-idonate catabolism -0.53
    6 GFF1660 Type IV fimbrial biogenesis protein PilY1 -0.52
    7 GFF2872 Cell division protein FtsL -0.52
    8 GFF5530 FIG00931903: hypothetical protein -0.52
    9 GFF6495 rifampin ADP-ribosyl transferase -0.51
    10 GFF1064 Transcriptional regulator, GntR family -0.51
    11 GFF5618 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.50
    12 GFF5879 LemA -0.50
    13 GFF2705 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.50
    14 GFF3460 Urea ABC transporter, ATPase protein UrtE -0.50
    15 GFF4830 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain -0.50
    16 GFF4539 no description -0.49
    17 GFF3335 no description -0.49
    18 GFF7076 no description -0.49
    19 GFF4045 no description -0.48
    20 GFF1392 Monooxygenase, flavin-binding family -0.48

    Or look for positive cofitness