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  • Negative cofitness for GFF4377 from Variovorax sp. SCN45

    putative plasmid stabilization protein
    SEED: putative plasmid stabilization protein
    KEGG: chromosome partitioning protein, ParB family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4945 probable GntR-family transcriptional regulator -0.65
    2 GFF891 Gfa-like protein -0.61
    3 GFF2680 Protein of unknown function DUF1058 -0.60
    4 GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family -0.60
    5 GFF2357 DNA repair protein RecN -0.59
    6 GFF6770 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) -0.59
    7 GFF2297 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) -0.57
    8 GFF5675 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) -0.57
    9 GFF3483 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.57
    10 GFF110 pyridoxal-phosphate dependent enzyme family protein -0.57
    11 GFF5984 L-lactate dehydrogenase -0.57
    12 GFF2131 Putative protease -0.56
    13 GFF945 Excinuclease ABC subunit B -0.56
    14 GFF1337 ABC transporter, substrate-binding protein RSc1750 -0.56
    15 GFF1775 no description -0.55
    16 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX -0.55
    17 GFF1371 Fe-S protein, homolog of lactate dehydrogenase SO1521 -0.55
    18 GFF2772 Site-specific tyrosine recombinase XerD -0.54
    19 GFF486 FIG00582348: hypothetical protein -0.54
    20 GFF3127 no description -0.54

    Or look for positive cofitness