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  • Negative cofitness for GFF4347 from Variovorax sp. SCN45

    High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
    SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7120 Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB -0.61
    2 GFF7378 protein of unknown function DUF1311 -0.58
    3 GFF87 no description -0.57
    4 GFF889 FIG00349738: hypothetical protein -0.56
    5 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) -0.56
    6 GFF4511 Transcriptional regulator, LysR family -0.55
    7 GFF3130 hypothetical protein -0.55
    8 GFF2652 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) -0.55
    9 GFF1044 hypothetical protein -0.55
    10 GFF4226 Acryloyl-CoA reductase AcuI/YhdH (EC 1.3.1.84) -0.54
    11 GFF3836 Cyclic beta-1,2-glucan synthase (EC 2.4.1.-) -0.53
    12 GFF3479 no description -0.53
    13 GFF6909 Amidohydrolase -0.53
    14 GFF266 RND efflux system, inner membrane transporter -0.53
    15 GFF5686 FIG01027227: hypothetical protein -0.52
    16 GFF1376 hypothetical protein -0.52
    17 GFF5429 Iron(III) dicitrate transport protein FecA -0.52
    18 GFF2835 putative TonB-dependent receptor -0.51
    19 GFF2836 MotA/TolQ/ExbB proton channel family protein -0.51
    20 GFF5865 Probable iron export permease protein FetB -0.51

    Or look for positive cofitness