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  • Negative cofitness for PS417_22165 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Chromosome initiation inhibitor
    KEGG: LysR family transcriptional regulator, chromosome initiation inhibitor

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_12945 sulfonate ABC transporter ATP-binding protein -0.23
    2 PS417_09740 RNA polymerase subunit sigma-24 -0.18
    3 PS417_22375 cold-shock protein -0.18
    4 PS417_23150 Cro/Cl family transcriptional regulator -0.18
    5 PS417_24715 lytic transglycosylase -0.18
    6 PS417_01960 pilus assembly protein -0.17
    7 PS417_17170 carbon-nitrogen hydrolase -0.17
    8 PS417_08000 beta-hydroxylase -0.17
    9 PS417_05910 glucan biosynthesis protein D -0.16
    10 PS417_01730 histidine ABC transporter substrate-binding protein -0.16
    11 PS417_14945 beta-lactamase -0.16
    12 PS417_10025 bacteriophage lambda NinG family protein -0.16
    13 PS417_02145 potassium transporter KefA -0.16
    14 PS417_07035 uracil-DNA glycosylase -0.16
    15 PS417_18425 sporulation protein -0.16
    16 PS417_10125 hypothetical protein -0.16
    17 PS417_14245 hypothetical protein -0.16
    18 PS417_14965 transcriptional regulator -0.16
    19 PS417_13065 UDP pyrophosphate phosphatase -0.15
    20 PS417_16225 sugar ABC transporter permease -0.15

    Or look for positive cofitness