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  • Negative cofitness for PS417_22145 from Pseudomonas simiae WCS417

    glucose/xylose ABC transporter, periplasmic substrate-binding component (from data)
    Original annotation: sugar ABC transporter substrate-binding protein
    SEED: Glucose ABC transport system, periplasmic sugar-binding protein
    KEGG: multiple sugar transport system substrate-binding protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_12125 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) -0.54
    2 PS417_12100 amino acid ABC transporter permease -0.35
    3 PS417_12095 ABC transporter substrate-binding protein -0.34
    4 PS417_21150 HAD family hydrolase -0.30
    5 PS417_12105 ABC transporter permease -0.28
    6 PS417_11040 aldose epimerase -0.28
    7 PS417_11170 aldehyde dehydrogenase -0.25
    8 PS417_21040 sulfurylase -0.25
    9 PS417_21050 serine acetyltransferase -0.25
    10 PS417_12610 RNA polymerase sigma factor -0.24
    11 PS417_06365 RNA polymerase sigma factor -0.24
    12 PS417_13425 cupin -0.23
    13 PS417_21945 RNA polymerase subunit sigma-24 -0.22
    14 PS417_21045 cysteine synthase -0.22
    15 PS417_15335 hypothetical protein -0.21
    16 PS417_12530 LysR family transcriptional regulator -0.21
    17 PS417_09690 sugar dehydrogenase -0.20
    18 PS417_20955 secretion protein -0.20
    19 PS417_24820 ethanolamine ammonia-lyase -0.20
    20 PS417_05240 Lon protease -0.19

    Or look for positive cofitness