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  • Negative cofitness for GFF432 from Variovorax sp. SCN45

    Probable transcription regulator protein of MDR efflux pump cluster
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7048 hypothetical protein -0.65
    2 GFF3504 BUG/TctC family periplasmic protein -0.60
    3 GFF1489 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like -0.55
    4 GFF5762 Flagellar motor rotation protein MotB -0.54
    5 GFF2022 Acyl-CoA dehydrogenase -0.50
    6 GFF6061 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) -0.50
    7 GFF7259 no description -0.48
    8 GFF7319 hypothetical protein -0.48
    9 GFF6452 Putative diheme cytochrome c-553 -0.48
    10 GFF4665 no description -0.48
    11 GFF4034 Cobalt/zinc/cadmium resistance protein CzcD -0.48
    12 GFF6636 Hydrolase, alpha/beta fold family -0.47
    13 GFF1016 no description -0.47
    14 GFF2685 DNA internalization-related competence protein ComEC/Rec2 -0.47
    15 GFF216 Transmembrane regulator protein PrtR -0.46
    16 GFF4903 no description -0.46
    17 GFF2113 NADH dehydrogenase (EC 1.6.99.3) -0.45
    18 GFF5938 T6SS component TssF (ImpG/VasA) -0.45
    19 GFF3212 Oxidoreductase -0.45
    20 GFF5039 no description -0.44

    Or look for positive cofitness