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  • Negative cofitness for GFF4316 from Sphingobium sp. HT1-2

    IncF plasmid conjugative transfer pilus assembly protein TraL
    SEED: IncF plasmid conjugative transfer pilus assembly protein TraL
    KEGG: conjugal transfer pilus assembly protein TraL

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2690 CzcABC family efflux RND transporter, membrane fusion protein -0.69
    2 GFF2138 hypothetical protein -0.68
    3 GFF3089 hypothetical protein -0.67
    4 GFF2539 hypothetical protein -0.66
    5 GFF1534 hypothetical protein -0.65
    6 GFF3307 hypothetical protein -0.63
    7 GFF2871 4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC 4.1.3.17) -0.62
    8 GFF2886 FIG033680: Hypothetical protein -0.60
    9 GFF4797 hypothetical protein -0.60
    10 GFF1252 hypothetical protein -0.59
    11 GFF3734 Flagellar basal body-associated protein FliL -0.59
    12 GFF2332 Glutathione S-transferase (EC 2.5.1.18) -0.59
    13 GFF3515 General secretion pathway protein H -0.58
    14 GFF2166 hypothetical protein -0.57
    15 GFF758 hypothetical protein -0.57
    16 GFF1841 alkaline phosphatase, putative -0.56
    17 GFF1580 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) -0.56
    18 GFF3092 hypothetical protein -0.56
    19 GFF229 Short-chain dehydrogenase/reductase SDR -0.56
    20 GFF780 hypothetical protein -0.56

    Or look for positive cofitness