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  • Negative cofitness for GFF4300 from Sphingobium sp. HT1-2

    IncF plasmid conjugative transfer pilus assembly protein TraF
    SEED: IncF plasmid conjugative transfer pilus assembly protein TraF
    KEGG: conjugal transfer pilus assembly protein TraF

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1210 Formiminoglutamic iminohydrolase (EC 3.5.3.13) -0.84
    2 GFF42 hypothetical protein -0.82
    3 GFF3500 Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1) -0.78
    4 GFF2046 hypothetical protein -0.77
    5 GFF1632 AmpG permease -0.77
    6 GFF5335 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid -0.76
    7 GFF3872 Putative hydroxylase -0.76
    8 GFF4083 FIG01094649: hypothetical protein -0.76
    9 GFF2173 hypothetical protein -0.75
    10 GFF2502 Two-component transcriptional response regulator, OmpR family -0.75
    11 GFF1739 hypothetical protein -0.75
    12 GFF1842 hypothetical protein -0.74
    13 GFF3474 hypothetical protein -0.74
    14 GFF787 Lysine decarboxylase family -0.73
    15 GFF5171 hypothetical protein -0.73
    16 GFF1704 hypothetical protein -0.73
    17 GFF5248 hypothetical protein -0.72
    18 GFF3564 hypothetical protein -0.72
    19 GFF3789 Periplasmic aromatic amino acid aminotransferase beta precursor (EC 2.6.1.57) -0.72
    20 GFF20 hypothetical protein -0.72

    Or look for positive cofitness