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  • Negative cofitness for GFF4299 from Sphingobium sp. HT1-2

    IncF plasmid conjugative transfer pilus assembly protein TraH
    SEED: IncF plasmid conjugative transfer pilus assembly protein TraH
    KEGG: conjugative transfer pilus assembly protein TraH

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3678 hypothetical protein -0.73
    2 GFF2856 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) -0.70
    3 GFF5140 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) -0.70
    4 GFF3558 Putative head protein (ACLAME 50) -0.67
    5 GFF4117 Intracellular protease -0.66
    6 GFF5059 Integrase-like protein -0.65
    7 GFF643 ATP-dependent Clp protease adaptor protein ClpS -0.64
    8 GFF3705 Flagellar hook-associated protein FlgK -0.63
    9 GFF3824 hypothetical protein -0.62
    10 GFF1871 Beta-carotene ketolase -0.62
    11 GFF1060 'NADH pyrophosphatase (EC 3.6.1.22), decaps 5'-NAD modified RNA' transl_table=11 -0.61
    12 GFF1555 hypothetical protein -0.60
    13 GFF3929 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) -0.59
    14 GFF3070 hypothetical protein -0.59
    15 GFF3556 Gene Transfer Agent terminase protein -0.59
    16 GFF2606 conserved hypothetical protein -0.59
    17 GFF4985 hypothetical protein -0.59
    18 GFF1841 alkaline phosphatase, putative -0.58
    19 GFF3971 hypothetical protein -0.58
    20 GFF241 hypothetical protein -0.58

    Or look for positive cofitness